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Table 2 Age-related hearing loss-associated loci commonly identified in recent genome-wide association studies

From: Common genetic etiologies of sensorineural hearing loss in Koreans

rsID number

Chromosome

position (hg38)

Effect allele

Other allele

Gene

Coding change

Consequence

East Asian AFa

Korean AFb

Odds ratio

rs36062310

chr22: 50549676

A

G

KLHDC7B

NM_138433.5; p.Val504Met

Missense variant

0.00009022

-

1.027

rs10901863

chr10:125123701

T

C

CTBP2

 

Intron variant

0.1782

-

1.011

rs5756795

chr22:37726115

C

T

TRIOBP

NM_001039141.3; p.Phe1187Leu

Missense variant

0.5642

0.603120

0.992

rs9493627

chr6:133468590

A

G

EYA4

NM_004100.5; p.Gly277Ser

Missense variant

0.3518

0.391820

1.009

rs67307131

chr11:118609508

C

T

PHLDB1

 

Intron variant

0.3099

-

0.992

rs11238325

chr7:50785454

C

T

GRB10

 

Intron variant

0.7107

0.711810

1.007

rs6545432

chr2:54590546

G

A

SPTBN1

 

Intron variant

0.4387

0.467130

1.007

rs7525101

chr1:165139894

T

C

LMX1A

 

Intergenic variant

0.6343

0.597030

1.006

rs143796236

chr17:81528943

T

C

FSCN2

NM_001077182.3; p.His138Tyr

Missense variant

0.00002277

-

1.035

rs13171669

chr5:149221680

G

A

ABLIM3

 

Intron variant

0.5945

0.556470

0.942

rs920701

chr13:75842965

C

T

LMO7

 

Intron variant

0.3611

0.354260

0.942

rs11881070

chr19:2389142

T

C

TMPRSS9

 

Upstream gene variant

0.5452

0.563680

0.942

rs143282422

chr10:71617355

A

G

CDH23

NM_022124.6; p.Ala366Thr

Missense variant

0.00004456

-

1.032

  1. AF allele frequency
  2. agnomAD v4.1.10 browser (https://gnomad.broadinstitute.org/; accessed on 16 August 2024)
  3. bKOVA.v2 (Korean Variant Archive for a reference database of genetic variations in the Korean population; https://kobic.re.kr/kova/)